Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 AP000346.4-201ENST00000614827 381 ntBASIC13.29□□□□□ -0.28
GDF1P27539 AC133540.1-201ENST00000620845 1019 ntBASIC13.29□□□□□ -0.28
GDF1P27539 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 MTHFR-210ENST00000641407 2387 ntBASIC13.29□□□□□ -0.28
GDF1P27539 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GDF1P27539 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GDF1P27539 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.28□□□□□ -0.28
GDF1P27539 AC144522.1-201ENST00000625111 1658 ntBASIC13.28□□□□□ -0.28
GDF1P27539 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GDF1P27539 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.28□□□□□ -0.28
GDF1P27539 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.28□□□□□ -0.28
GDF1P27539 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 SPTLC1P5-201ENST00000450718 252 ntBASIC13.28□□□□□ -0.28
GDF1P27539 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.28□□□□□ -0.28
GDF1P27539 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.28□□□□□ -0.28
GDF1P27539 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 SNORD3B-2-202ENST00000571722 791 ntBASIC13.28□□□□□ -0.28
GDF1P27539 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.28□□□□□ -0.28
GDF1P27539 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.28□□□□□ -0.28
GDF1P27539 AL132994.2-201ENST00000603120 687 ntBASIC13.28□□□□□ -0.28
GDF1P27539 AL645939.5-201ENST00000606834 243 ntBASIC13.28□□□□□ -0.28
GDF1P27539 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.28□□□□□ -0.28
GDF1P27539 NAP1L6-202ENST00000641404 1222 ntBASIC13.28□□□□□ -0.28
GDF1P27539 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.28□□□□□ -0.28
GDF1P27539 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GDF1P27539 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.28□□□□□ -0.28
GDF1P27539 FAM90A7P-201ENST00000382628 1395 ntBASIC13.28□□□□□ -0.28
GDF1P27539 FAM90A23P-201ENST00000400136 1395 ntBASIC13.28□□□□□ -0.28
GDF1P27539 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.28□□□□□ -0.28
GDF1P27539 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 AC015656.1-201ENST00000624209 3578 ntBASIC13.28□□□□□ -0.28
GDF1P27539 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.28□□□□□ -0.28
GDF1P27539 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDF1P27539 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GDF1P27539 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
GDF1P27539 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.27□□□□□ -0.28
GDF1P27539 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.27□□□□□ -0.28
GDF1P27539 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.27□□□□□ -0.28
GDF1P27539 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.27□□□□□ -0.28
GDF1P27539 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDF1P27539 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms