Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 SLC25A47P1-201ENST00000531577 414 ntBASIC14.54□□□□□ -0.08
VARSP26640 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.54□□□□□ -0.08
VARSP26640 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.54□□□□□ -0.08
VARSP26640 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.54□□□□□ -0.08
VARSP26640 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 MIR6787-201ENST00000616675 61 ntBASIC14.54□□□□□ -0.08
VARSP26640 MIR6869-201ENST00000619434 62 ntBASIC14.54□□□□□ -0.08
VARSP26640 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 AL034417.3-201ENST00000641100 1043 ntBASIC14.54□□□□□ -0.08
VARSP26640 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 AC018665.1-201ENST00000622927 1362 ntBASIC14.54□□□□□ -0.08
VARSP26640 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VARSP26640 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VARSP26640 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VARSP26640 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VARSP26640 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VARSP26640 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.53□□□□□ -0.08
VARSP26640 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.53□□□□□ -0.08
VARSP26640 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VARSP26640 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 AC092933.1-201ENST00000393644 945 ntBASIC14.53□□□□□ -0.08
VARSP26640 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.53□□□□□ -0.08
VARSP26640 BAATP1-201ENST00000412284 1225 ntBASIC14.53□□□□□ -0.08
VARSP26640 TMEM14DP-201ENST00000422205 345 ntBASIC14.53□□□□□ -0.08
VARSP26640 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 SEC63P1-201ENST00000425785 1258 ntBASIC14.53□□□□□ -0.08
VARSP26640 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 AC012441.1-201ENST00000446669 685 ntBASIC14.53□□□□□ -0.08
VARSP26640 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC14.53□□□□□ -0.08
VARSP26640 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.53□□□□□ -0.08
VARSP26640 PTP4A1P2-201ENST00000546033 454 ntBASIC14.53□□□□□ -0.08
VARSP26640 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.53□□□□□ -0.08
VARSP26640 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.53□□□□□ -0.08
VARSP26640 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.53□□□□□ -0.08
VARSP26640 RN7SL440P-201ENST00000577855 343 ntBASIC14.53□□□□□ -0.08
VARSP26640 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VARSP26640 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VARSP26640 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
VARSP26640 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.52□□□□□ -0.08
VARSP26640 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.52□□□□□ -0.08
VARSP26640 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.52□□□□□ -0.08
VARSP26640 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.52□□□□□ -0.08
VARSP26640 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms