Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
XPAP23025 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
XPAP23025 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 AC015688.4-201ENST00000580780 1647 ntBASIC14.81□□□□□ -0.04
XPAP23025 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 AC007686.3-201ENST00000619017 3487 ntBASIC14.81□□□□□ -0.04
XPAP23025 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.81□□□□□ -0.04
XPAP23025 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.81□□□□□ -0.04
XPAP23025 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.81□□□□□ -0.04
XPAP23025 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.81□□□□□ -0.04
XPAP23025 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.81□□□□□ -0.04
XPAP23025 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.81□□□□□ -0.04
XPAP23025 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 MIR3615-201ENST00000581999 87 ntBASIC14.81□□□□□ -0.04
XPAP23025 RN7SL163P-201ENST00000583100 276 ntBASIC14.81□□□□□ -0.04
XPAP23025 MIR6720-201ENST00000611664 98 ntBASIC14.81□□□□□ -0.04
XPAP23025 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
XPAP23025 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
XPAP23025 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
XPAP23025 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.81□□□□□ -0.04
XPAP23025 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.81□□□□□ -0.04
XPAP23025 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.81□□□□□ -0.04
XPAP23025 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 AC013726.1-201ENST00000563747 2285 ntBASIC14.81□□□□□ -0.04
XPAP23025 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
XPAP23025 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.81□□□□□ -0.04
XPAP23025 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 AC244394.1-201ENST00000435000 1665 ntBASIC14.81□□□□□ -0.04
XPAP23025 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XPAP23025 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
XPAP23025 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.8□□□□□ -0.04
XPAP23025 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.8□□□□□ -0.04
XPAP23025 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.8□□□□□ -0.04
XPAP23025 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 AC091804.1-201ENST00000486888 567 ntBASIC14.8□□□□□ -0.04
XPAP23025 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.8□□□□□ -0.04
XPAP23025 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.8□□□□□ -0.04
XPAP23025 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 AC008805.1-201ENST00000590892 364 ntBASIC14.8□□□□□ -0.04
XPAP23025 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.8□□□□□ -0.04
XPAP23025 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.8□□□□□ -0.04
XPAP23025 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
XPAP23025 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
XPAP23025 AL008718.2-201ENST00000609206 1313 ntBASIC14.8□□□□□ -0.04
XPAP23025 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.8□□□□□ -0.04
XPAP23025 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.8□□□□□ -0.04
XPAP23025 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms