Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT13P13646 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT13P13646 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT13P13646 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT13P13646 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT13P13646 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT13P13646 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.08■□□□□ 0.16
KRT13P13646 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT13P13646 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT13P13646 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
KRT13P13646 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT13P13646 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT13P13646 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
KRT13P13646 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT13P13646 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 AL355994.2-201ENST00000447882 704 ntBASIC16.07■□□□□ 0.16
KRT13P13646 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.07■□□□□ 0.16
KRT13P13646 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.07■□□□□ 0.16
KRT13P13646 AC023310.1-201ENST00000554836 735 ntBASIC16.07■□□□□ 0.16
KRT13P13646 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.07■□□□□ 0.16
KRT13P13646 AL512343.1-201ENST00000605837 169 ntBASIC16.07■□□□□ 0.16
KRT13P13646 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.07■□□□□ 0.16
KRT13P13646 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT13P13646 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT13P13646 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT13P13646 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
KRT13P13646 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT13P13646 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT13P13646 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KRT13P13646 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
KRT13P13646 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 KHSRPP1-201ENST00000427983 1768 ntBASIC16.06■□□□□ 0.16
KRT13P13646 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT13P13646 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT13P13646 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.06■□□□□ 0.16
KRT13P13646 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT13P13646 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
KRT13P13646 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.06■□□□□ 0.16
KRT13P13646 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT13P13646 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT13P13646 PPY2P-201ENST00000582808 702 ntBASIC16.06■□□□□ 0.16
KRT13P13646 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.06■□□□□ 0.16
KRT13P13646 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT13P13646 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT13P13646 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
KRT13P13646 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 AC006504.5-208ENST00000588784 2401 ntBASIC16.06■□□□□ 0.16
KRT13P13646 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT13P13646 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT13P13646 AC215219.1-201ENST00000400706 1817 ntBASIC16.05■□□□□ 0.16
KRT13P13646 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KRT13P13646 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
KRT13P13646 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
KRT13P13646 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT13P13646 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT13P13646 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT13P13646 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT13P13646 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms