Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RBP1P09455 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.48□□□□□ -0.09
RBP1P09455 PEG13-201ENST00000631594 5667 ntBASIC14.48□□□□□ -0.09
RBP1P09455 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RBP1P09455 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RBP1P09455 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RBP1P09455 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.47□□□□□ -0.09
RBP1P09455 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.47□□□□□ -0.09
RBP1P09455 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.47□□□□□ -0.09
RBP1P09455 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.47□□□□□ -0.09
RBP1P09455 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.47□□□□□ -0.09
RBP1P09455 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.47□□□□□ -0.09
RBP1P09455 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 AC089987.1-201ENST00000551654 2209 ntBASIC14.47□□□□□ -0.09
RBP1P09455 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RBP1P09455 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.47□□□□□ -0.09
RBP1P09455 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.47□□□□□ -0.09
RBP1P09455 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.47□□□□□ -0.09
RBP1P09455 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RBP1P09455 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
RBP1P09455 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.46□□□□□ -0.09
RBP1P09455 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
RBP1P09455 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.46□□□□□ -0.09
RBP1P09455 TUBB8P4-201ENST00000511806 1324 ntBASIC14.46□□□□□ -0.09
RBP1P09455 AL138709.1-201ENST00000614840 1693 ntBASIC14.46□□□□□ -0.09
RBP1P09455 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.46□□□□□ -0.09
RBP1P09455 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RBP1P09455 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.46□□□□□ -0.09
RBP1P09455 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.46□□□□□ -0.09
RBP1P09455 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.46□□□□□ -0.09
RBP1P09455 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 TPM3P8-201ENST00000330554 643 ntBASIC14.46□□□□□ -0.09
RBP1P09455 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.46□□□□□ -0.09
RBP1P09455 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RBP1P09455 RN7SKP175-201ENST00000408472 289 ntBASIC14.46□□□□□ -0.09
RBP1P09455 ARSEP1-201ENST00000420443 635 ntBASIC14.46□□□□□ -0.09
RBP1P09455 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.46□□□□□ -0.09
RBP1P09455 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.46□□□□□ -0.09
RBP1P09455 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.46□□□□□ -0.09
RBP1P09455 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.46□□□□□ -0.09
RBP1P09455 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RBP1P09455 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
RBP1P09455 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.46□□□□□ -0.09
RBP1P09455 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms