Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CHRNA1P02708 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.77■□□□□ 0.12
CHRNA1P02708 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
CHRNA1P02708 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CHRNA1P02708 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.77■□□□□ 0.12
CHRNA1P02708 GUSBP10-201ENST00000417412 665 ntBASIC15.77■□□□□ 0.12
CHRNA1P02708 AL354861.1-201ENST00000445213 355 ntBASIC15.77■□□□□ 0.12
CHRNA1P02708 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.77■□□□□ 0.12
CHRNA1P02708 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.77■□□□□ 0.12
CHRNA1P02708 SORD2P-201ENST00000558556 1069 ntBASIC15.77■□□□□ 0.12
CHRNA1P02708 AC005586.2-201ENST00000563946 837 ntBASIC15.77■□□□□ 0.12
CHRNA1P02708 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.77■□□□□ 0.12
CHRNA1P02708 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.77■□□□□ 0.12
CHRNA1P02708 AC105137.3-201ENST00000617588 984 ntBASIC15.77■□□□□ 0.12
CHRNA1P02708 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHRNA1P02708 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.77■□□□□ 0.11
CHRNA1P02708 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.77■□□□□ 0.11
CHRNA1P02708 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHRNA1P02708 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.77■□□□□ 0.11
CHRNA1P02708 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CHRNA1P02708 AC023157.3-201ENST00000619086 2088 ntBASIC15.77■□□□□ 0.11
CHRNA1P02708 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.77■□□□□ 0.11
CHRNA1P02708 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
CHRNA1P02708 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHRNA1P02708 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHRNA1P02708 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CHRNA1P02708 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.77■□□□□ 0.11
CHRNA1P02708 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.76■□□□□ 0.11
CHRNA1P02708 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CHRNA1P02708 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 MYADML-201ENST00000474610 2147 ntBASIC15.76■□□□□ 0.11
CHRNA1P02708 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.76■□□□□ 0.11
CHRNA1P02708 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
CHRNA1P02708 AL161932.2-201ENST00000435436 679 ntBASIC15.76■□□□□ 0.11
CHRNA1P02708 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CHRNA1P02708 AP003398.1-201ENST00000531124 318 ntBASIC15.76■□□□□ 0.11
CHRNA1P02708 CR383656.3-201ENST00000551315 183 ntBASIC15.76■□□□□ 0.11
CHRNA1P02708 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.76■□□□□ 0.11
CHRNA1P02708 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 NUDT4P2-201ENST00000578341 546 ntBASIC15.76■□□□□ 0.11
CHRNA1P02708 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 RN7SL470P-201ENST00000583069 259 ntBASIC15.76■□□□□ 0.11
CHRNA1P02708 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.76■□□□□ 0.11
CHRNA1P02708 AL132780.4-201ENST00000624870 1135 ntBASIC15.76■□□□□ 0.11
CHRNA1P02708 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CHRNA1P02708 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHRNA1P02708 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.76■□□□□ 0.11
CHRNA1P02708 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 AC090502.4-201ENST00000551714 1386 ntBASIC15.75■□□□□ 0.11
CHRNA1P02708 AC215219.1-201ENST00000400706 1817 ntBASIC15.75■□□□□ 0.11
CHRNA1P02708 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.75■□□□□ 0.11
CHRNA1P02708 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms