Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 AC079776.1-201ENST00000401540 1152 ntBASIC17.04■□□□□ 0.32
CDKL5O76039 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.04■□□□□ 0.32
CDKL5O76039 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.04■□□□□ 0.32
CDKL5O76039 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL5O76039 GPR53P-205ENST00000457298 1084 ntBASIC17.04■□□□□ 0.32
CDKL5O76039 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.04■□□□□ 0.32
CDKL5O76039 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.04■□□□□ 0.32
CDKL5O76039 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL5O76039 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CDKL5O76039 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CDKL5O76039 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKL5O76039 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKL5O76039 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKL5O76039 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKL5O76039 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.03■□□□□ 0.32
CDKL5O76039 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDKL5O76039 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.03■□□□□ 0.32
CDKL5O76039 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.03■□□□□ 0.32
CDKL5O76039 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKL5O76039 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.03■□□□□ 0.32
CDKL5O76039 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL5O76039 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDKL5O76039 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDKL5O76039 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDKL5O76039 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDKL5O76039 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL5O76039 MIR1909-201ENST00000411312 80 ntBASIC17.02■□□□□ 0.32
CDKL5O76039 AC079178.1-201ENST00000420915 656 ntBASIC17.02■□□□□ 0.32
CDKL5O76039 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.02■□□□□ 0.32
CDKL5O76039 ACA64.2-201ENST00000459014 129 ntBASIC17.02■□□□□ 0.32
CDKL5O76039 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.02■□□□□ 0.32
CDKL5O76039 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.02■□□□□ 0.32
CDKL5O76039 DUX4L46-201ENST00000566845 751 ntBASIC17.02■□□□□ 0.32
CDKL5O76039 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL5O76039 AC132192.2-201ENST00000596206 1147 ntBASIC17.02■□□□□ 0.32
CDKL5O76039 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDKL5O76039 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CDKL5O76039 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL5O76039 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDKL5O76039 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL5O76039 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL5O76039 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.02■□□□□ 0.31
CDKL5O76039 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CDKL5O76039 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL5O76039 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CDKL5O76039 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL5O76039 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDKL5O76039 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL5O76039 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms