Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
XRCC2O43543 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.8□□□□□ -0.36
XRCC2O43543 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 AC092933.1-201ENST00000393644 945 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.8□□□□□ -0.36
XRCC2O43543 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
XRCC2O43543 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
XRCC2O43543 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.8□□□□□ -0.36
XRCC2O43543 PUDPP3-201ENST00000445368 636 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
XRCC2O43543 AL391280.1-201ENST00000506969 1062 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.8□□□□□ -0.36
XRCC2O43543 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.8□□□□□ -0.36
XRCC2O43543 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.8□□□□□ -0.36
XRCC2O43543 AC103988.2-201ENST00000561804 725 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 BTNL10-201ENST00000595971 695 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 ECM1P1-201ENST00000604092 1279 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 AP001002.3-201ENST00000623482 206 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 AC090505.1-201ENST00000430515 1834 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 AC020910.5-201ENST00000623668 1865 ntBASIC12.8□□□□□ -0.36
XRCC2O43543 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.79□□□□□ -0.36
XRCC2O43543 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.79□□□□□ -0.36
XRCC2O43543 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.79□□□□□ -0.36
XRCC2O43543 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
XRCC2O43543 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.79□□□□□ -0.36
XRCC2O43543 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.79□□□□□ -0.36
XRCC2O43543 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
XRCC2O43543 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 AC139712.1-201ENST00000378256 1875 ntBASIC12.79□□□□□ -0.36
XRCC2O43543 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.79□□□□□ -0.36
XRCC2O43543 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
XRCC2O43543 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.79□□□□□ -0.36
XRCC2O43543 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.79□□□□□ -0.36
XRCC2O43543 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.79□□□□□ -0.36
XRCC2O43543 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
XRCC2O43543 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 AL137784.3-201ENST00000623858 2288 ntBASIC12.79□□□□□ -0.36
XRCC2O43543 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
XRCC2O43543 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
XRCC2O43543 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
XRCC2O43543 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms