Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AC004899.1-201ENST00000424687 1714 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 RN7SKP230-201ENST00000365642 335 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 DPM3-202ENST00000368399 517 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 TLE1P1-201ENST00000422965 589 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 Z97180.1-201ENST00000445173 988 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AC104073.2-201ENST00000453737 312 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 RN7SL11P-201ENST00000471305 293 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 BNIP3P13-201ENST00000599968 566 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AC022748.3-201ENST00000621828 275 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AL162426.1-201ENST00000624141 743 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 AL138725.1-201ENST00000407347 1314 ntBASIC13.39□□□□□ -0.27
NPIPA2E9PIF3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AC011742.3-201ENST00000439053 820 ntBASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 SPTLC1P5-201ENST00000450718 252 ntBASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 DUX4L46-201ENST00000566845 751 ntBASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms