Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.85□□□□□ -0.67
NACAE9PAV3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 AC107918.4-201ENST00000641966 3141 ntBASIC10.84□□□□□ -0.67
NACAE9PAV3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC10.84□□□□□ -0.67
NACAE9PAV3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC10.84□□□□□ -0.67
NACAE9PAV3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 AC015936.2-201ENST00000593177 259 ntBASIC10.84□□□□□ -0.67
NACAE9PAV3 AL359881.2-201ENST00000602973 570 ntBASIC10.84□□□□□ -0.67
NACAE9PAV3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NACAE9PAV3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
NACAE9PAV3 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NACAE9PAV3 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
NACAE9PAV3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
NACAE9PAV3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 ARSEP1-201ENST00000420443 635 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 RPS2P32-201ENST00000439199 892 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.83□□□□□ -0.68
NACAE9PAV3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC10.83□□□□□ -0.68
NACAE9PAV3 GAPDHP40-201ENST00000505218 1006 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AP005482.1-201ENST00000563722 1273 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC120045.2-201ENST00000567334 178 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.83□□□□□ -0.68
NACAE9PAV3 GNRHR2-203ENST00000581100 1187 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC10.83□□□□□ -0.68
NACAE9PAV3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 INTS4P2-202ENST00000614726 2019 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms