Protein–RNA interactions for Protein: A6NCF5

KLHL33, Kelch-like protein 33, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL33A6NCF5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 AC138466.3-201ENST00000619983 221 ntBASIC14.78□□□□□ -0.04
KLHL33A6NCF5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 MST1P2-201ENST00000457982 2291 ntBASIC14.78□□□□□ -0.04
KLHL33A6NCF5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
KLHL33A6NCF5 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 FLJ16779-201ENST00000612722 7638 ntBASIC14.77□□□□□ -0.04
KLHL33A6NCF5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KLHL33A6NCF5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 AC007969.1-201ENST00000433675 447 ntBASIC14.77□□□□□ -0.05
KLHL33A6NCF5 FAM8A4P-201ENST00000435433 1213 ntBASIC14.77□□□□□ -0.05
KLHL33A6NCF5 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 AC244669.2-201ENST00000612320 853 ntBASIC14.77□□□□□ -0.05
KLHL33A6NCF5 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.77□□□□□ -0.05
KLHL33A6NCF5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 AP000593.2-201ENST00000542775 1433 ntBASIC14.76□□□□□ -0.05
KLHL33A6NCF5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 YBX1P6-201ENST00000442962 1002 ntBASIC14.76□□□□□ -0.05
KLHL33A6NCF5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 RNA5SP412-201ENST00000516234 123 ntBASIC14.76□□□□□ -0.05
KLHL33A6NCF5 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.76□□□□□ -0.05
KLHL33A6NCF5 AC078819.1-201ENST00000547454 765 ntBASIC14.76□□□□□ -0.05
KLHL33A6NCF5 AC012085.1-201ENST00000548270 765 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms