Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NME6-203ENST00000415644 849 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CD8B2-202ENST00000417670 633 ntBASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 Z93015.1-201ENST00000451718 390 ntBASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC108725.1-201ENST00000495472 409 ntBASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC022616.1-201ENST00000518688 554 ntBASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MIR4741-201ENST00000579822 90 ntBASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC243960.2-201ENST00000600996 747 ntBASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ENPP7P14-201ENST00000621765 1040 ntBASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL157414.3-201ENST00000624276 1954 ntBASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MIR326-201ENST00000362220 95 ntBASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KRT8P14-201ENST00000414254 1442 ntBASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TCRBV4S1A1TA0A5B7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms