Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 AC106760.1-201ENST00000508690 800 ntBASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 AP001889.1-201ENST00000525414 633 ntBASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 AL022328.1-201ENST00000610050 478 ntBASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 ENPP7P14-201ENST00000621765 1040 ntBASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 MTHFR-210ENST00000641407 2387 ntBASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 AL138709.1-201ENST00000614840 1693 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 COX5BP8-201ENST00000416911 349 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 C2orf27AP3-201ENST00000434123 579 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 KRT17P7-201ENST00000451704 1104 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 FO681548.1-201ENST00000455617 1132 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 USP32P1-208ENST00000506594 1164 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms