Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AL023803.3-201ENST00000615559 522 ntBASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AC080013.1-204ENST00000607426 2185 ntBASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 AC093525.7-201ENST00000569852 3626 ntBASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LINC01558Q9Y6Z2 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LINC01558Q9Y6Z2 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 CD99-202ENST00000381180 530 ntTSL 2 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 AL020989.1-201ENST00000422979 469 ntBASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 AC097488.1-201ENST00000507834 756 ntBASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 AC137761.2-201ENST00000561729 223 ntBASIC7.46□□□□□ -1.22
LINC01558Q9Y6Z2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms