Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 KHSRPP1-201ENST00000427983 1768 ntBASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 RN7SL832P-201ENST00000607781 1756 ntBASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 ALG1L8P-201ENST00000533887 760 ntBASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 SLC25A6P4-201ENST00000586535 553 ntBASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 AL133215.2-201ENST00000609242 977 ntBASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 AF228730.6-201ENST00000641497 218 ntBASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 AC084121.3-201ENST00000641716 218 ntBASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ERGIC3Q9Y282 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ERGIC3Q9Y282 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 HLA-A-201ENST00000376802 1334 ntBASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 TOMM22P5-201ENST00000416399 439 ntBASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 MTND6P24-201ENST00000440466 518 ntBASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 SERBP1P3-201ENST00000459980 809 ntBASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 AC009078.2-202ENST00000463353 338 ntBASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 LINC00628-201ENST00000628516 1289 ntBASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms