Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 AL589935.2-201ENST00000616471 1231 ntBASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 CR392039.1-201ENST00000623217 204 ntBASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ZC3H4Q9UPT8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 PPP1R2P4-201ENST00000424051 595 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 SNORD3B-1-201ENST00000577988 758 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 FBXO36P1-201ENST00000579006 471 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 FAM45BP-202ENST00000592932 1624 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 WASH3P-207ENST00000560956 1394 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 AC023090.2-201ENST00000625182 2110 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 PPT1-215ENST00000641471 2368 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 AC112504.1-201ENST00000623415 1841 ntBASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.49■□□□□ 0.39
ZC3H4Q9UPT8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 ASS1P2-201ENST00000439895 1223 ntBASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 RN7SL121P-201ENST00000584223 273 ntBASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 AL591471.1-201ENST00000621855 229 ntBASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZC3H4Q9UPT8 AP000354.1-201ENST00000396982 456 ntBASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 OR8T1P-201ENST00000421347 918 ntBASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZC3H4Q9UPT8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms