Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC145285.1-201ENST00000469929 694 ntBASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 DIS3L2P1-201ENST00000509197 559 ntBASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 MIR6749-201ENST00000617008 69 ntBASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 RNA5SP407-201ENST00000410275 110 ntBASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 RPS15P5-201ENST00000449885 432 ntBASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 AC013472.3-201ENST00000607407 659 ntBASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
RIMBP3Q9UFD9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 PKD1P6-201ENST00000343738 4769 ntBASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 AL391822.1-201ENST00000452580 562 ntBASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 CD81-209ENST00000492627 886 ntTSL 3 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 PES1P2-201ENST00000449745 1735 ntBASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RIMBP3Q9UFD9 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 NAA10-205ENST00000393712 908 ntTSL 5 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 SSR4P1-201ENST00000415143 412 ntBASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 ACP1-207ENST00000439645 605 ntTSL 2 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 IGHV3OR16-11-201ENST00000565524 349 ntBASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 AL109983.1-201ENST00000603234 646 ntBASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 PIGA-209ENST00000634582 965 ntTSL 2 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 AC087481.3-201ENST00000602886 1894 ntBASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 AC041040.1-201ENST00000425197 460 ntBASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms