Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4Q9NQC3 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 LINC02453-201ENST00000501499 1825 ntTSL 2 BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTN4Q9NQC3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 AL391001.1-201ENST00000602747 715 ntBASIC17.58■□□□□ 0.4
RTN4Q9NQC3 AC079414.3-201ENST00000612986 1090 ntBASIC17.58■□□□□ 0.4
RTN4Q9NQC3 AC004877.2-201ENST00000623941 599 ntBASIC17.58■□□□□ 0.4
RTN4Q9NQC3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RTN4Q9NQC3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 LINC00567-201ENST00000569854 3409 ntBASIC17.57■□□□□ 0.4
RTN4Q9NQC3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 AL157712.1-201ENST00000620178 2055 ntBASIC17.57■□□□□ 0.4
RTN4Q9NQC3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 LINC00638-201ENST00000555578 2518 ntBASIC17.57■□□□□ 0.4
RTN4Q9NQC3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 FGFR2-202ENST00000346997 2472 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.57■□□□□ 0.4
RTN4Q9NQC3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 PSG6-209ENST00000601833 2321 ntTSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 MRPL3P1-201ENST00000400109 1033 ntBASIC17.57■□□□□ 0.4
RTN4Q9NQC3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 AC079776.4-201ENST00000511039 504 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms