Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AL591846.1-201ENST00000451736 433 ntBASIC15.54■□□□□ 0.08
CD248Q9HCU0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AC091271.1-201ENST00000611877 1162 ntBASIC15.54■□□□□ 0.08
CD248Q9HCU0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.54■□□□□ 0.08
CD248Q9HCU0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AL359881.3-201ENST00000602640 1721 ntBASIC15.54■□□□□ 0.08
CD248Q9HCU0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD248Q9HCU0 AC087386.2-201ENST00000623212 4637 ntBASIC15.53■□□□□ 0.08
CD248Q9HCU0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 BCYRN1-201ENST00000418539 200 ntBASIC15.53■□□□□ 0.08
CD248Q9HCU0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 AC114812.1-204ENST00000449669 728 ntBASIC15.53■□□□□ 0.08
CD248Q9HCU0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 AC243960.2-201ENST00000600996 747 ntBASIC15.53■□□□□ 0.08
CD248Q9HCU0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.53■□□□□ 0.08
CD248Q9HCU0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.53■□□□□ 0.08
CD248Q9HCU0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD248Q9HCU0 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD248Q9HCU0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 Z93015.1-201ENST00000451718 390 ntBASIC15.52■□□□□ 0.08
CD248Q9HCU0 KRT8P13-201ENST00000463294 1010 ntBASIC15.52■□□□□ 0.08
CD248Q9HCU0 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.52■□□□□ 0.08
CD248Q9HCU0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms