Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AL161932.2-201ENST00000435436 679 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 KLF2P3-201ENST00000451977 1087 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AC109322.1-201ENST00000524499 1264 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AP001582.1-201ENST00000525856 295 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AC140878.1-201ENST00000565277 250 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AC027612.4-201ENST00000605371 583 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 BX088702.1-201ENST00000610784 235 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 Z92544.3-201ENST00000624747 417 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 LRRC59-203ENST00000576448 1531 ntBASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.34□□□□□ -0.27
GABARAPL3Q9BY60 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
GABARAPL3Q9BY60 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
GABARAPL3Q9BY60 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GABARAPL3Q9BY60 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.33□□□□□ -0.27
GABARAPL3Q9BY60 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GABARAPL3Q9BY60 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AL359845.1-201ENST00000458202 1648 ntBASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AC254562.1-201ENST00000417586 456 ntBASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 ALG3P1-201ENST00000508806 1114 ntBASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AL158211.3-201ENST00000607385 239 ntBASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 AL590560.3-201ENST00000623350 461 ntBASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
GABARAPL3Q9BY60 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms