Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 AC012618.1-201ENST00000461223 412 ntBASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 MIR4754-201ENST00000582477 89 ntBASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPAP1Q9BWH6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPAP1Q9BWH6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
RPAP1Q9BWH6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
RPAP1Q9BWH6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 AL008718.2-201ENST00000609206 1313 ntBASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 RN7SKP214-201ENST00000364208 315 ntBASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 Z98259.2-201ENST00000641583 609 ntBASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 AL590440.2-201ENST00000641973 1595 ntBASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 FAM90A7P-201ENST00000382628 1395 ntBASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 FAM90A23P-201ENST00000400136 1395 ntBASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 AC244394.1-201ENST00000435000 1665 ntBASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPAP1Q9BWH6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AL035414.1-201ENST00000451327 857 ntBASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AC242376.1-201ENST00000559033 726 ntBASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AC020922.3-201ENST00000595064 547 ntBASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AC018635.2-201ENST00000608625 364 ntBASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPAP1Q9BWH6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms