Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFI1Q99684 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 CLUHP2-201ENST00000426660 1303 ntBASIC12.63□□□□□ -0.39
GFI1Q99684 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 AC125807.2-201ENST00000513358 3514 ntBASIC12.63□□□□□ -0.39
GFI1Q99684 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 AL161932.2-201ENST00000435436 679 ntBASIC12.63□□□□□ -0.39
GFI1Q99684 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.63□□□□□ -0.39
GFI1Q99684 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 AC004890.2-204ENST00000481968 304 ntBASIC12.63□□□□□ -0.39
GFI1Q99684 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.63□□□□□ -0.39
GFI1Q99684 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
GFI1Q99684 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 AC025678.2-201ENST00000562061 970 ntBASIC12.63□□□□□ -0.39
GFI1Q99684 AL359711.2-201ENST00000563105 872 ntBASIC12.63□□□□□ -0.39
GFI1Q99684 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
GFI1Q99684 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.63□□□□□ -0.39
GFI1Q99684 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.63□□□□□ -0.39
GFI1Q99684 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 AC104506.1-201ENST00000609247 429 ntBASIC12.63□□□□□ -0.39
GFI1Q99684 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
GFI1Q99684 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFI1Q99684 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
GFI1Q99684 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.63□□□□□ -0.39
GFI1Q99684 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GFI1Q99684 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
GFI1Q99684 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GFI1Q99684 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GFI1Q99684 AC022144.1-201ENST00000602255 1580 ntBASIC12.62□□□□□ -0.39
GFI1Q99684 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GFI1Q99684 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 KRT8P28-201ENST00000433288 1390 ntBASIC12.62□□□□□ -0.39
GFI1Q99684 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GFI1Q99684 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.62□□□□□ -0.39
GFI1Q99684 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.62□□□□□ -0.39
GFI1Q99684 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 MIR943-201ENST00000401286 94 ntBASIC12.62□□□□□ -0.39
GFI1Q99684 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.62□□□□□ -0.39
GFI1Q99684 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFI1Q99684 MYCLP2-201ENST00000449268 967 ntBASIC12.62□□□□□ -0.39
GFI1Q99684 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms