Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.96□□□□□ -0.5
RAB40CQ96S21 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.96□□□□□ -0.5
RAB40CQ96S21 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
RAB40CQ96S21 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
RAB40CQ96S21 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
RAB40CQ96S21 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.96□□□□□ -0.5
RAB40CQ96S21 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
RAB40CQ96S21 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB40CQ96S21 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.95□□□□□ -0.5
RAB40CQ96S21 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 HLA-V-204ENST00000476601 1289 ntBASIC11.95□□□□□ -0.5
RAB40CQ96S21 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AL512361.1-201ENST00000554200 418 ntBASIC11.95□□□□□ -0.5
RAB40CQ96S21 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 DUX4L47-201ENST00000566374 394 ntBASIC11.95□□□□□ -0.5
RAB40CQ96S21 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AC027612.4-201ENST00000605371 583 ntBASIC11.95□□□□□ -0.5
RAB40CQ96S21 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AC139530.3-201ENST00000620344 690 ntBASIC11.95□□□□□ -0.5
RAB40CQ96S21 AL603764.1-201ENST00000636452 321 ntBASIC11.95□□□□□ -0.5
RAB40CQ96S21 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AC015688.4-201ENST00000580780 1647 ntBASIC11.95□□□□□ -0.5
RAB40CQ96S21 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB40CQ96S21 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB40CQ96S21 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms