Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AC020907.1-201ENST00000616460 1350 ntBASIC15.15■□□□□ 0.02
CCDC97Q96F63 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 FO681548.1-201ENST00000455617 1132 ntBASIC15.15■□□□□ 0.02
CCDC97Q96F63 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 RPL13AP25-201ENST00000484130 612 ntBASIC15.15■□□□□ 0.02
CCDC97Q96F63 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.15■□□□□ 0.02
CCDC97Q96F63 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.15■□□□□ 0.02
CCDC97Q96F63 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC97Q96F63 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC97Q96F63 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 AC093813.1-201ENST00000605066 256 ntBASIC15.14■□□□□ 0.01
CCDC97Q96F63 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC97Q96F63 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC97Q96F63 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms