Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM11Q96F44 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM11Q96F44 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 AL354989.2-201ENST00000435838 1540 ntBASIC15.53■□□□□ 0.08
TRIM11Q96F44 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 AL136309.1-201ENST00000403917 691 ntBASIC15.53■□□□□ 0.08
TRIM11Q96F44 AL512384.1-201ENST00000406683 331 ntBASIC15.53■□□□□ 0.08
TRIM11Q96F44 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 FAM197Y7-201ENST00000432892 766 ntBASIC15.53■□□□□ 0.08
TRIM11Q96F44 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 RN7SL713P-201ENST00000582127 302 ntBASIC15.53■□□□□ 0.08
TRIM11Q96F44 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 BTNL10-201ENST00000595971 695 ntBASIC15.53■□□□□ 0.08
TRIM11Q96F44 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 AC138951.2-201ENST00000623455 1161 ntBASIC15.53■□□□□ 0.08
TRIM11Q96F44 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 HSPA8P5-201ENST00000456928 2069 ntBASIC15.53■□□□□ 0.08
TRIM11Q96F44 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM11Q96F44 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM11Q96F44 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM11Q96F44 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM11Q96F44 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM11Q96F44 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM11Q96F44 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM11Q96F44 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 INE1-201ENST00000456273 945 ntBASIC15.52■□□□□ 0.08
TRIM11Q96F44 FTH1P14-201ENST00000482930 551 ntBASIC15.52■□□□□ 0.08
TRIM11Q96F44 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM11Q96F44 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 AC005586.2-201ENST00000563946 837 ntBASIC15.52■□□□□ 0.08
TRIM11Q96F44 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM11Q96F44 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms