Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.59□□□□□ -0.07
ECHDC3Q96DC8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ECHDC3Q96DC8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.59□□□□□ -0.07
ECHDC3Q96DC8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.59□□□□□ -0.07
ECHDC3Q96DC8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ECHDC3Q96DC8 INTS4P1-203ENST00000641008 3683 ntBASIC14.59□□□□□ -0.07
ECHDC3Q96DC8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ECHDC3Q96DC8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ECHDC3Q96DC8 AC005912.2-201ENST00000619492 2400 ntBASIC14.58□□□□□ -0.07
ECHDC3Q96DC8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
ECHDC3Q96DC8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
ECHDC3Q96DC8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
ECHDC3Q96DC8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ECHDC3Q96DC8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ECHDC3Q96DC8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 SPTLC1P5-201ENST00000450718 252 ntBASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 ACTG1P17-201ENST00000558391 1119 ntBASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 RN7SL774P-201ENST00000577467 290 ntBASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 BX640514.1-201ENST00000583223 1918 ntBASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ECHDC3Q96DC8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 AC005077.2-201ENST00000449786 690 ntBASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 AC090386.2-201ENST00000623010 1039 ntBASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 AL161772.1-201ENST00000610494 4412 ntBASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ECHDC3Q96DC8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ECHDC3Q96DC8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ECHDC3Q96DC8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ECHDC3Q96DC8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.56□□□□□ -0.08
ECHDC3Q96DC8 AL133338.1-201ENST00000565695 1517 ntBASIC14.56□□□□□ -0.08
ECHDC3Q96DC8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms