Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 ASS1P2-201ENST00000439895 1223 ntBASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 HNRNPA1P42-201ENST00000458678 957 ntBASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 RN7SL788P-201ENST00000460504 316 ntBASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 AC015688.4-201ENST00000580780 1647 ntBASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 ODCP-201ENST00000459650 1639 ntBASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AL391005.1-201ENST00000623953 2435 ntBASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AC006987.1-201ENST00000413610 527 ntBASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AL512599.1-201ENST00000430724 685 ntBASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 IGHEP2-201ENST00000519308 1256 ntBASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AL590235.1-201ENST00000564650 861 ntBASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 LAP3P2-201ENST00000454686 1454 ntBASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 AL513477.1-201ENST00000602865 2407 ntBASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM43Q96BQ3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM43Q96BQ3 EEF1GP8-201ENST00000506566 1154 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms