Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 AC027612.1-201ENST00000445234 2395 ntBASIC14.17□□□□□ -0.14
VPS33AQ96AX1 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AC099521.3-201ENST00000624251 2938 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 SPDYE19P-201ENST00000338590 713 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 KLF2P2-201ENST00000416807 1039 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AC134915.1-201ENST00000426461 574 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 MIR8072-201ENST00000614241 80 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.16□□□□□ -0.14
VPS33AQ96AX1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS33AQ96AX1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 TCAF1P1-201ENST00000414990 2232 ntBASIC14.15□□□□□ -0.14
VPS33AQ96AX1 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 PPT1-213ENST00000641319 2388 ntBASIC14.15□□□□□ -0.14
VPS33AQ96AX1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS33AQ96AX1 C1QBPP1-201ENST00000400117 770 ntBASIC14.15□□□□□ -0.14
VPS33AQ96AX1 MRPS18AP1-201ENST00000414458 589 ntBASIC14.15□□□□□ -0.14
VPS33AQ96AX1 TLE1P1-201ENST00000422965 589 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms