Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.18■□□□□ 0.34
STAG1Q8WVM7 AL008707.1-201ENST00000422498 534 ntBASIC17.18■□□□□ 0.34
STAG1Q8WVM7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 PGAM1P5-201ENST00000548011 764 ntBASIC17.18■□□□□ 0.34
STAG1Q8WVM7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 AC124068.2-201ENST00000569473 1109 ntBASIC17.18■□□□□ 0.34
STAG1Q8WVM7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 AC023908.3-201ENST00000564211 3047 ntBASIC17.18■□□□□ 0.34
STAG1Q8WVM7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 AC104581.4-201ENST00000623126 3052 ntBASIC17.18■□□□□ 0.34
STAG1Q8WVM7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 AHCYP4-201ENST00000419201 1315 ntBASIC17.18■□□□□ 0.34
STAG1Q8WVM7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
STAG1Q8WVM7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 CYP46A4P-201ENST00000414953 267 ntBASIC17.17■□□□□ 0.34
STAG1Q8WVM7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 AC125604.1-201ENST00000496255 707 ntBASIC17.17■□□□□ 0.34
STAG1Q8WVM7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 AC012617.1-204ENST00000586340 2305 ntBASIC17.17■□□□□ 0.34
STAG1Q8WVM7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 AC026740.1-201ENST00000607068 791 ntBASIC17.17■□□□□ 0.34
STAG1Q8WVM7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.17■□□□□ 0.34
STAG1Q8WVM7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 AL009178.2-201ENST00000597278 2719 ntBASIC17.16■□□□□ 0.34
STAG1Q8WVM7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.16■□□□□ 0.34
STAG1Q8WVM7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms