Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 MIR769-201ENST00000390225 118 ntBASIC13.08□□□□□ -0.32
RNF138Q8WVD3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 RPS9P1-201ENST00000419943 583 ntBASIC13.08□□□□□ -0.32
RNF138Q8WVD3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 RN7SL530P-201ENST00000485097 298 ntBASIC13.08□□□□□ -0.32
RNF138Q8WVD3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 MIR4754-201ENST00000582477 89 ntBASIC13.08□□□□□ -0.32
RNF138Q8WVD3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 AC138627.1-207ENST00000641560 1006 ntBASIC13.08□□□□□ -0.32
RNF138Q8WVD3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 FRMPD2B-201ENST00000431305 1347 ntBASIC13.08□□□□□ -0.32
RNF138Q8WVD3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 BRD7P5-201ENST00000299197 1822 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AC022494.1-201ENST00000466044 728 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 RN7SL277P-201ENST00000481521 288 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AC090857.1-201ENST00000527400 390 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 PHBP15-201ENST00000574228 665 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 RN7SL574P-201ENST00000581512 297 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AF254983.2-201ENST00000612331 135 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AP001505.2-201ENST00000616815 443 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 RPL13AP3-202ENST00000494676 1473 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AL133338.1-201ENST00000565695 1517 ntBASIC13.07□□□□□ -0.32
RNF138Q8WVD3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF138Q8WVD3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF138Q8WVD3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF138Q8WVD3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF138Q8WVD3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF138Q8WVD3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.06□□□□□ -0.32
RNF138Q8WVD3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms