Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC135586.1-201ENST00000539323 574 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 SAMD11P1-201ENST00000571429 661 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC106028.4-201ENST00000614509 607 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC093512.1-201ENST00000617969 520 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC139530.3-201ENST00000620344 690 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC004899.2-201ENST00000622993 3860 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AL354702.1-201ENST00000442006 1960 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 LILRP1-201ENST00000444199 1370 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC018665.1-201ENST00000622927 1362 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 TSSK5P-201ENST00000423978 907 ntBASIC12.78□□□□□ -0.36
CCDC107Q8WV48 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AC114501.2-201ENST00000439631 535 ntBASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AL512638.1-201ENST00000457493 794 ntBASIC12.78□□□□□ -0.36
CCDC107Q8WV48 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AC009407.1-201ENST00000568958 598 ntBASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AL158212.4-201ENST00000624062 1286 ntBASIC12.78□□□□□ -0.36
CCDC107Q8WV48 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AC090505.1-201ENST00000430515 1834 ntBASIC12.78□□□□□ -0.36
CCDC107Q8WV48 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 MEX3B-202ENST00000558133 4333 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms