Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 AL008638.5-201ENST00000623814 1298 ntBASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 TUBB8P4-201ENST00000511806 1324 ntBASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHROOM3Q8TF72 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AC005077.2-201ENST00000449786 690 ntBASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AC091804.1-201ENST00000486888 567 ntBASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 MIR7845-201ENST00000618396 99 ntBASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHROOM3Q8TF72 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.86□□□□□ -0.03
SHROOM3Q8TF72 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHROOM3Q8TF72 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SHROOM3Q8TF72 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHROOM3Q8TF72 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHROOM3Q8TF72 AC011474.4-201ENST00000623523 2076 ntBASIC14.86□□□□□ -0.03
SHROOM3Q8TF72 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms