Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB42Q8N4Z0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AC100850.1-201ENST00000506768 649 ntBASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AC103988.2-201ENST00000561804 725 ntBASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 MIR6074-201ENST00000612054 107 ntBASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB42Q8N4Z0 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 CICP12-201ENST00000455801 843 ntBASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 PFN1P12-201ENST00000455938 534 ntBASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 AC021723.1-201ENST00000486306 515 ntBASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 AL583810.1-201ENST00000553344 1045 ntBASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 AC009884.2-201ENST00000603110 324 ntBASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB42Q8N4Z0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms