Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 AC018629.1-201ENST00000623381 1736 ntBASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 AL359258.3-201ENST00000622910 2331 ntBASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 AL807761.2-201ENST00000422849 729 ntBASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNPOQ8N3V7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 KRT18P36-201ENST00000411618 1276 ntBASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 AL627389.1-201ENST00000413508 1182 ntBASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 RPL17P45-201ENST00000586289 509 ntBASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 AC007292.2-201ENST00000593524 1812 ntBASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 WASH3P-207ENST00000560956 1394 ntBASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SYNPOQ8N3V7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms