Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 AL355864.2-201ENST00000447420 863 ntBASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 RN7SL752P-201ENST00000463779 287 ntBASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 AC079781.5-202ENST00000641784 3743 ntBASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 AC130686.1-201ENST00000622936 2466 ntBASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC83Q8IWF9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 BCRP2-202ENST00000447763 634 ntBASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 ALG3P1-201ENST00000508806 1114 ntBASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 BCRP6-201ENST00000510112 632 ntBASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 BCRP7-201ENST00000511549 544 ntBASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 MIR4683-201ENST00000579659 81 ntBASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 OR10B1P-201ENST00000601666 907 ntBASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC83Q8IWF9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms