Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 FAM86C2P-203ENST00000528684 1004 ntBASIC12.25□□□□□ -0.45
ZNF546Q86UE3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 AL135744.1-201ENST00000565098 629 ntBASIC12.25□□□□□ -0.45
ZNF546Q86UE3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 AP3S2-216ENST00000617003 1561 ntBASIC12.25□□□□□ -0.45
ZNF546Q86UE3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZNF546Q86UE3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 AC136604.1-202ENST00000425471 771 ntBASIC12.24□□□□□ -0.45
ZNF546Q86UE3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 MIR6074-201ENST00000612054 107 ntBASIC12.24□□□□□ -0.45
ZNF546Q86UE3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF546Q86UE3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms