Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.44□□□□□ -0.58
KCNIP4Q6PIL6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AC136604.1-201ENST00000418535 575 ntBASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AC079781.3-201ENST00000449110 356 ntBASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AC061975.2-201ENST00000581722 295 ntBASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.43□□□□□ -0.58
KCNIP4Q6PIL6 FAM95B1-212ENST00000592873 4692 ntBASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.42□□□□□ -0.58
KCNIP4Q6PIL6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms