Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 AC023824.1-201ENST00000562945 2975 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 FES-203ENST00000394302 2133 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 U3.5-201ENST00000363448 216 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 ACTBP14-201ENST00000411655 1089 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 HMGA1P1-201ENST00000415560 1062 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 KRT18P15-201ENST00000458108 1291 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 RPS18P9-201ENST00000482817 460 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 GGNBP1-204ENST00000613113 887 ntBASIC21.41■■□□□ 1.02
CDC42BPAQ5VT25 AP001267.2-201ENST00000532619 2086 ntBASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 AC092115.1-201ENST00000566277 1402 ntBASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 AP000354.1-201ENST00000396982 456 ntBASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 KNOP1P1-201ENST00000542108 989 ntBASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 AP001527.2-201ENST00000614441 631 ntBASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPAQ5VT25 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC21.39■■□□□ 1.02
CDC42BPAQ5VT25 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
CDC42BPAQ5VT25 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC21.39■■□□□ 1.02
CDC42BPAQ5VT25 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
CDC42BPAQ5VT25 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CDC42BPAQ5VT25 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 AP000244.1-201ENST00000424582 201 ntBASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 NRADDP-201ENST00000437305 691 ntBASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPAQ5VT25 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 SEPHS2P1-201ENST00000511618 1162 ntBASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 AC100858.1-201ENST00000514059 1228 ntBASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 MIR5001-201ENST00000580185 100 ntBASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 HLA-DMA-202ENST00000395303 1007 ntBASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 MT3-202ENST00000561640 514 ntTSL 3 BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC42BPAQ5VT25 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42BPAQ5VT25 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms