Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 COX20P2-201ENST00000452636 358 ntBASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 AC011495.1-201ENST00000498085 584 ntBASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 AC022447.6-201ENST00000515522 438 ntBASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 AL596325.1-201ENST00000563991 1082 ntBASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 WASH4P-201ENST00000564273 1246 ntBASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.82□□□□□ -0.36
ATPAF1Q5TC12 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 AC114812.1-204ENST00000449669 728 ntBASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 AP001063.1-201ENST00000568332 529 ntBASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 CU634019.7-201ENST00000624153 1185 ntBASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 FP236241.2-201ENST00000624906 1185 ntBASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 KRT8P24-201ENST00000560290 1559 ntBASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATPAF1Q5TC12 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms