Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 AC015688.4-201ENST00000580780 1647 ntBASIC16.45■□□□□ 0.22
HERC4Q5GLZ8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 AC117489.1-201ENST00000625169 3217 ntBASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 COX5BP1-201ENST00000507622 393 ntBASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.44■□□□□ 0.22
HERC4Q5GLZ8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 FNTAP2-201ENST00000430308 634 ntBASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 MIR4683-201ENST00000579659 81 ntBASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 MIR3619-201ENST00000579667 83 ntBASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AC020914.3-201ENST00000594712 304 ntBASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms