Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN20Q4JDL3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 GOLGA2P4-201ENST00000441462 777 ntBASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 Z93015.1-201ENST00000451718 390 ntBASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 AC005730.2-201ENST00000564549 1184 ntBASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN20Q4JDL3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 AC100827.2-201ENST00000563214 1194 ntBASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 AC005586.2-201ENST00000563946 837 ntBASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 AC104506.1-201ENST00000609247 429 ntBASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 AL096828.3-201ENST00000615354 462 ntBASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN20Q4JDL3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms