Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 AC005840.4-201ENST00000541242 2494 ntBASIC14.17□□□□□ -0.14
PCDH1Q08174 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.17□□□□□ -0.14
PCDH1Q08174 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDH1Q08174 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.17□□□□□ -0.14
PCDH1Q08174 CICP12-201ENST00000455801 843 ntBASIC14.17□□□□□ -0.14
PCDH1Q08174 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.17□□□□□ -0.14
PCDH1Q08174 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDH1Q08174 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 AC079316.1-201ENST00000548397 411 ntBASIC14.17□□□□□ -0.14
PCDH1Q08174 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 AC027601.3-201ENST00000622907 509 ntBASIC14.17□□□□□ -0.14
PCDH1Q08174 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PCDH1Q08174 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PCDH1Q08174 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDH1Q08174 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDH1Q08174 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.16□□□□□ -0.14
PCDH1Q08174 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
PCDH1Q08174 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDH1Q08174 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDH1Q08174 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
PCDH1Q08174 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDH1Q08174 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDH1Q08174 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 AL162274.1-201ENST00000617191 1098 ntBASIC14.16□□□□□ -0.14
PCDH1Q08174 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PCDH1Q08174 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PCDH1Q08174 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDH1Q08174 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
PCDH1Q08174 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.16□□□□□ -0.14
PCDH1Q08174 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDH1Q08174 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms