Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 MEP1AP4-201ENST00000423244 1087 ntBASIC11.34□□□□□ -0.59
HIST1H1AQ02539 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 RN7SL399P-201ENST00000471648 279 ntBASIC11.34□□□□□ -0.59
HIST1H1AQ02539 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AC023310.3-201ENST00000557027 670 ntBASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AC100756.1-201ENST00000562736 682 ntBASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AC138749.3-201ENST00000567691 622 ntBASIC11.34□□□□□ -0.59
HIST1H1AQ02539 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AL391069.4-201ENST00000609583 481 ntBASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AC116165.1-201ENST00000611806 668 ntBASIC11.34□□□□□ -0.59
HIST1H1AQ02539 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HIST1H1AQ02539 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
HIST1H1AQ02539 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 AL353779.1-201ENST00000434793 351 ntBASIC11.33□□□□□ -0.6
HIST1H1AQ02539 GAPDHP40-201ENST00000505218 1006 ntBASIC11.33□□□□□ -0.6
HIST1H1AQ02539 AC026410.3-201ENST00000514280 936 ntBASIC11.33□□□□□ -0.6
HIST1H1AQ02539 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HIST1H1AQ02539 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms