Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC008741.2-201ENST00000612792 3115 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SCN7AQ01118 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN7AQ01118 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN7AQ01118 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.67■□□□□ 0.42
SCN7AQ01118 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCN7AQ01118 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.67■□□□□ 0.42
SCN7AQ01118 HLA-DPA2-205ENST00000433582 733 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 RN7SL288P-201ENST00000490496 291 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN7AQ01118 AL359219.1-201ENST00000556311 934 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.67■□□□□ 0.42
SCN7AQ01118 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN7AQ01118 AC132825.4-202ENST00000578792 434 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCN7AQ01118 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.67■□□□□ 0.42
SCN7AQ01118 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN7AQ01118 AC126755.5-201ENST00000622756 267 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN7AQ01118 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 AC007952.5-201ENST00000572818 1486 ntBASIC17.67■□□□□ 0.42
SCN7AQ01118 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN7AQ01118 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN7AQ01118 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SCN7AQ01118 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SCN7AQ01118 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN7AQ01118 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN7AQ01118 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN7AQ01118 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN7AQ01118 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SCN7AQ01118 GGTLC4P-201ENST00000402176 664 ntBASIC17.66■□□□□ 0.42
SCN7AQ01118 ACTBP14-201ENST00000411655 1089 ntBASIC17.66■□□□□ 0.42
SCN7AQ01118 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.66■□□□□ 0.42
SCN7AQ01118 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN7AQ01118 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN7AQ01118 ZNF877P-201ENST00000437614 612 ntBASIC17.66■□□□□ 0.42
SCN7AQ01118 AC092903.1-201ENST00000466506 262 ntBASIC17.66■□□□□ 0.42
SCN7AQ01118 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 AC068831.5-201ENST00000557387 328 ntBASIC17.66■□□□□ 0.42
SCN7AQ01118 AP001527.2-201ENST00000614441 631 ntBASIC17.66■□□□□ 0.42
SCN7AQ01118 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SCN7AQ01118 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SCN7AQ01118 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN7AQ01118 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN7AQ01118 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN7AQ01118 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SCN7AQ01118 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SCN7AQ01118 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN7AQ01118 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SCN7AQ01118 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN7AQ01118 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN7AQ01118 TUBB8P4-201ENST00000511806 1324 ntBASIC17.65■□□□□ 0.42
SCN7AQ01118 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN7AQ01118 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SCN7AQ01118 AP000354.1-201ENST00000396982 456 ntBASIC17.65■□□□□ 0.42
SCN7AQ01118 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.65■□□□□ 0.42
SCN7AQ01118 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.65■□□□□ 0.42
SCN7AQ01118 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.65■□□□□ 0.42
SCN7AQ01118 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SCN7AQ01118 KNOP1P1-201ENST00000542108 989 ntBASIC17.65■□□□□ 0.42
SCN7AQ01118 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN7AQ01118 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SCN7AQ01118 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.65■□□□□ 0.42
SCN7AQ01118 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.65■□□□□ 0.42
SCN7AQ01118 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.65■□□□□ 0.42
SCN7AQ01118 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN7AQ01118 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN7AQ01118 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.65■□□□□ 0.42
SCN7AQ01118 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN7AQ01118 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.64■□□□□ 0.42
SCN7AQ01118 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms