Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDKL1Q00532 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 AL512384.1-201ENST00000406683 331 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 RN7SKP175-201ENST00000408472 289 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.48□□□□□ -0.09
CDKL1Q00532 C2orf27AP3-201ENST00000434123 579 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 INE1-201ENST00000456273 945 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.48□□□□□ -0.09
CDKL1Q00532 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.48□□□□□ -0.09
CDKL1Q00532 RNA5SP486-201ENST00000515961 83 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.48□□□□□ -0.09
CDKL1Q00532 AC106820.3-201ENST00000561653 397 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.48□□□□□ -0.09
CDKL1Q00532 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.48□□□□□ -0.09
CDKL1Q00532 AC008735.3-201ENST00000596646 500 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 AL354718.3-201ENST00000616414 581 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 CR382287.1-201ENST00000623954 586 ntBASIC14.48□□□□□ -0.09
CDKL1Q00532 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
CDKL1Q00532 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CDKL1Q00532 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDKL1Q00532 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDKL1Q00532 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CDKL1Q00532 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDKL1Q00532 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.48□□□□□ -0.09
CDKL1Q00532 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDKL1Q00532 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.47□□□□□ -0.09
CDKL1Q00532 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.47□□□□□ -0.09
CDKL1Q00532 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.47□□□□□ -0.09
CDKL1Q00532 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDKL1Q00532 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.47□□□□□ -0.09
CDKL1Q00532 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDKL1Q00532 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 TTTY23B-201ENST00000442790 549 ntBASIC14.47□□□□□ -0.09
CDKL1Q00532 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 AL391280.1-201ENST00000506969 1062 ntBASIC14.47□□□□□ -0.09
CDKL1Q00532 AP005018.1-201ENST00000525475 301 ntBASIC14.47□□□□□ -0.09
CDKL1Q00532 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.47□□□□□ -0.09
CDKL1Q00532 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.47□□□□□ -0.09
CDKL1Q00532 AC103988.2-201ENST00000561804 725 ntBASIC14.47□□□□□ -0.09
CDKL1Q00532 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 BTNL10-201ENST00000595971 695 ntBASIC14.47□□□□□ -0.09
CDKL1Q00532 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.47□□□□□ -0.09
CDKL1Q00532 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.47□□□□□ -0.09
CDKL1Q00532 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDKL1Q00532 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDKL1Q00532 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms