Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
HTRA4P83105 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HTRA4P83105 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 AL109809.1-201ENST00000418979 1367 ntBASIC15.27■□□□□ 0.04
HTRA4P83105 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HTRA4P83105 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.27■□□□□ 0.04
HTRA4P83105 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
HTRA4P83105 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.27■□□□□ 0.04
HTRA4P83105 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 HLA-DPA2-205ENST00000433582 733 ntBASIC15.27■□□□□ 0.04
HTRA4P83105 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.27■□□□□ 0.04
HTRA4P83105 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.27■□□□□ 0.04
HTRA4P83105 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTRA4P83105 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.27■□□□□ 0.04
HTRA4P83105 CHCHD2P2-201ENST00000503744 321 ntBASIC15.27■□□□□ 0.04
HTRA4P83105 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.27■□□□□ 0.04
HTRA4P83105 AC068831.5-201ENST00000557387 328 ntBASIC15.27■□□□□ 0.04
HTRA4P83105 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.27■□□□□ 0.04
HTRA4P83105 MIR4265-201ENST00000582152 99 ntBASIC15.27■□□□□ 0.04
HTRA4P83105 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.27■□□□□ 0.04
HTRA4P83105 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
HTRA4P83105 DGAT2L7P-201ENST00000602462 744 ntBASIC15.27■□□□□ 0.04
HTRA4P83105 AL009176.1-201ENST00000607876 650 ntBASIC15.27■□□□□ 0.04
HTRA4P83105 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.27■□□□□ 0.04
HTRA4P83105 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.27■□□□□ 0.03
HTRA4P83105 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTRA4P83105 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTRA4P83105 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTRA4P83105 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.27■□□□□ 0.03
HTRA4P83105 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
HTRA4P83105 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTRA4P83105 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTRA4P83105 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HTRA4P83105 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.27■□□□□ 0.03
HTRA4P83105 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.27■□□□□ 0.03
HTRA4P83105 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HTRA4P83105 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.27■□□□□ 0.03
HTRA4P83105 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.27■□□□□ 0.03
HTRA4P83105 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.27■□□□□ 0.03
HTRA4P83105 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTRA4P83105 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTRA4P83105 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HTRA4P83105 KRT8P18-201ENST00000413425 1445 ntBASIC15.26■□□□□ 0.03
HTRA4P83105 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HTRA4P83105 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.26■□□□□ 0.03
HTRA4P83105 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.26■□□□□ 0.03
HTRA4P83105 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.26■□□□□ 0.03
HTRA4P83105 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTRA4P83105 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
HTRA4P83105 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.26■□□□□ 0.03
HTRA4P83105 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HTRA4P83105 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
HTRA4P83105 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
HTRA4P83105 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
HTRA4P83105 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
HTRA4P83105 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.26■□□□□ 0.03
HTRA4P83105 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.26■□□□□ 0.03
HTRA4P83105 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.26■□□□□ 0.03
HTRA4P83105 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.26■□□□□ 0.03
HTRA4P83105 VENTXP4-201ENST00000449029 958 ntBASIC15.26■□□□□ 0.03
HTRA4P83105 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.26■□□□□ 0.03
HTRA4P83105 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.26■□□□□ 0.03
HTRA4P83105 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.26■□□□□ 0.03
HTRA4P83105 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.26■□□□□ 0.03
HTRA4P83105 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.26■□□□□ 0.03
HTRA4P83105 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.26■□□□□ 0.03
HTRA4P83105 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTRA4P83105 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTRA4P83105 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.26■□□□□ 0.03
HTRA4P83105 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.26■□□□□ 0.03
HTRA4P83105 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTRA4P83105 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.26■□□□□ 0.03
HTRA4P83105 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HTRA4P83105 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HTRA4P83105 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.25■□□□□ 0.03
HTRA4P83105 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms