Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 HIST2H2BA-201ENST00000412169 381 ntBASIC13.91□□□□□ -0.18
GABREP78334 FTH1P22-201ENST00000456305 520 ntBASIC13.91□□□□□ -0.18
GABREP78334 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 AC141586.1-203ENST00000567242 366 ntBASIC13.91□□□□□ -0.18
GABREP78334 MIR3180-2-201ENST00000581748 88 ntBASIC13.91□□□□□ -0.18
GABREP78334 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
GABREP78334 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
GABREP78334 AC105137.3-201ENST00000617588 984 ntBASIC13.91□□□□□ -0.18
GABREP78334 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.91□□□□□ -0.18
GABREP78334 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
GABREP78334 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 AL109954.1-202ENST00000564051 2148 ntBASIC13.91□□□□□ -0.18
GABREP78334 AC023090.2-201ENST00000625182 2110 ntBASIC13.91□□□□□ -0.18
GABREP78334 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GABREP78334 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GABREP78334 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GABREP78334 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 KRT8P31-201ENST00000504812 1408 ntBASIC13.9□□□□□ -0.18
GABREP78334 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.9□□□□□ -0.18
GABREP78334 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GABREP78334 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.9□□□□□ -0.18
GABREP78334 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GABREP78334 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GABREP78334 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.9□□□□□ -0.18
GABREP78334 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.9□□□□□ -0.18
GABREP78334 KRT18P36-201ENST00000411618 1276 ntBASIC13.9□□□□□ -0.18
GABREP78334 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.9□□□□□ -0.18
GABREP78334 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.9□□□□□ -0.18
GABREP78334 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.9□□□□□ -0.18
GABREP78334 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 AC114947.1-202ENST00000514136 344 ntBASIC13.9□□□□□ -0.18
GABREP78334 AC131206.1-201ENST00000538078 1211 ntBASIC13.9□□□□□ -0.18
GABREP78334 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.9□□□□□ -0.18
GABREP78334 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.9□□□□□ -0.18
GABREP78334 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.9□□□□□ -0.18
GABREP78334 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.9□□□□□ -0.18
GABREP78334 AC138466.4-201ENST00000623965 852 ntBASIC13.9□□□□□ -0.18
GABREP78334 AC025262.2-201ENST00000623975 1056 ntBASIC13.9□□□□□ -0.18
GABREP78334 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.9□□□□□ -0.18
GABREP78334 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GABREP78334 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GABREP78334 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms