Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.29□□□□□ -0.12
YBX1P67809 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.29□□□□□ -0.12
YBX1P67809 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
YBX1P67809 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.28□□□□□ -0.12
YBX1P67809 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
YBX1P67809 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.28□□□□□ -0.12
YBX1P67809 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
YBX1P67809 AL136309.1-201ENST00000403917 691 ntBASIC14.28□□□□□ -0.12
YBX1P67809 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
YBX1P67809 FAM21FP-201ENST00000426241 1131 ntBASIC14.28□□□□□ -0.12
YBX1P67809 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 AC022494.1-201ENST00000466044 728 ntBASIC14.28□□□□□ -0.12
YBX1P67809 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.28□□□□□ -0.12
YBX1P67809 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.28□□□□□ -0.12
YBX1P67809 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
YBX1P67809 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.28□□□□□ -0.12
YBX1P67809 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 MRPL37P1-201ENST00000592451 1337 ntBASIC14.28□□□□□ -0.12
YBX1P67809 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.28□□□□□ -0.12
YBX1P67809 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.28□□□□□ -0.12
YBX1P67809 BX088702.1-201ENST00000610784 235 ntBASIC14.28□□□□□ -0.12
YBX1P67809 ZACNP1-201ENST00000612259 710 ntBASIC14.28□□□□□ -0.12
YBX1P67809 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 AP001002.3-201ENST00000623482 206 ntBASIC14.28□□□□□ -0.12
YBX1P67809 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.28□□□□□ -0.12
YBX1P67809 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.28□□□□□ -0.12
YBX1P67809 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
YBX1P67809 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
YBX1P67809 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.28□□□□□ -0.12
YBX1P67809 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
YBX1P67809 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.27□□□□□ -0.12
YBX1P67809 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
YBX1P67809 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.27□□□□□ -0.12
YBX1P67809 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.27□□□□□ -0.12
YBX1P67809 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
YBX1P67809 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
YBX1P67809 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.27□□□□□ -0.12
YBX1P67809 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
YBX1P67809 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.27□□□□□ -0.12
YBX1P67809 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
YBX1P67809 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.27□□□□□ -0.13
YBX1P67809 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 MIR326-201ENST00000362220 95 ntBASIC14.27□□□□□ -0.13
YBX1P67809 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
YBX1P67809 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
YBX1P67809 GOLGA2P4-201ENST00000441462 777 ntBASIC14.27□□□□□ -0.13
YBX1P67809 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms