Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.96□□□□□ -0.17
SKP1P63208 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.96□□□□□ -0.17
SKP1P63208 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.96□□□□□ -0.17
SKP1P63208 CICP12-201ENST00000455801 843 ntBASIC13.96□□□□□ -0.17
SKP1P63208 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.96□□□□□ -0.17
SKP1P63208 RPSAP36-202ENST00000494591 1261 ntBASIC13.96□□□□□ -0.17
SKP1P63208 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.96□□□□□ -0.17
SKP1P63208 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.96□□□□□ -0.17
SKP1P63208 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
SKP1P63208 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.96□□□□□ -0.17
SKP1P63208 AC103988.2-201ENST00000561804 725 ntBASIC13.96□□□□□ -0.17
SKP1P63208 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.96□□□□□ -0.17
SKP1P63208 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.96□□□□□ -0.17
SKP1P63208 AL136295.7-201ENST00000619226 1200 ntBASIC13.96□□□□□ -0.17
SKP1P63208 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.96□□□□□ -0.17
SKP1P63208 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.96□□□□□ -0.17
SKP1P63208 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SKP1P63208 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SKP1P63208 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SKP1P63208 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.96□□□□□ -0.17
SKP1P63208 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.96□□□□□ -0.17
SKP1P63208 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SKP1P63208 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SKP1P63208 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
SKP1P63208 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.96□□□□□ -0.18
SKP1P63208 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SKP1P63208 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SKP1P63208 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.96□□□□□ -0.18
SKP1P63208 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SKP1P63208 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.96□□□□□ -0.18
SKP1P63208 KRT8P29-201ENST00000420409 1371 ntBASIC13.96□□□□□ -0.18
SKP1P63208 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.96□□□□□ -0.18
SKP1P63208 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SKP1P63208 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SKP1P63208 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SKP1P63208 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 AGGF1P1-201ENST00000509500 2073 ntBASIC13.95□□□□□ -0.18
SKP1P63208 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 AL390755.1-201ENST00000623716 2027 ntBASIC13.95□□□□□ -0.18
SKP1P63208 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.95□□□□□ -0.18
SKP1P63208 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 MIR663B-201ENST00000408361 115 ntBASIC13.95□□□□□ -0.18
SKP1P63208 GOLGA2P4-201ENST00000441462 777 ntBASIC13.95□□□□□ -0.18
SKP1P63208 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.95□□□□□ -0.18
SKP1P63208 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 AC106794.1-201ENST00000506935 792 ntBASIC13.95□□□□□ -0.18
SKP1P63208 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.95□□□□□ -0.18
SKP1P63208 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.95□□□□□ -0.18
SKP1P63208 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.95□□□□□ -0.18
SKP1P63208 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.95□□□□□ -0.18
SKP1P63208 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 AC126335.2-201ENST00000623362 4637 ntBASIC13.95□□□□□ -0.18
SKP1P63208 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SKP1P63208 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SKP1P63208 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.95□□□□□ -0.18
SKP1P63208 AC131212.3-201ENST00000624087 4219 ntBASIC13.95□□□□□ -0.18
SKP1P63208 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 AL354702.1-201ENST00000442006 1960 ntBASIC13.94□□□□□ -0.18
SKP1P63208 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.94□□□□□ -0.18
SKP1P63208 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 AL009178.2-201ENST00000597278 2719 ntBASIC13.94□□□□□ -0.18
SKP1P63208 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 KHSRPP1-201ENST00000427983 1768 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms