Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBA52P62987 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.78□□□□□ -0.36
UBA52P62987 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.78□□□□□ -0.36
UBA52P62987 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.78□□□□□ -0.36
UBA52P62987 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 HIST3H2BA-201ENST00000436555 524 ntBASIC12.78□□□□□ -0.36
UBA52P62987 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.78□□□□□ -0.36
UBA52P62987 BNIP3P42-201ENST00000454982 569 ntBASIC12.78□□□□□ -0.36
UBA52P62987 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.78□□□□□ -0.36
UBA52P62987 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.78□□□□□ -0.36
UBA52P62987 FAM8A2P-201ENST00000528813 1142 ntBASIC12.78□□□□□ -0.36
UBA52P62987 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
UBA52P62987 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.78□□□□□ -0.36
UBA52P62987 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.78□□□□□ -0.36
UBA52P62987 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 BNIP3P29-201ENST00000598302 571 ntBASIC12.78□□□□□ -0.36
UBA52P62987 AC233724.13-201ENST00000598383 410 ntBASIC12.78□□□□□ -0.36
UBA52P62987 AC011447.5-201ENST00000616168 564 ntBASIC12.78□□□□□ -0.36
UBA52P62987 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UBA52P62987 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 AC018665.1-201ENST00000622927 1362 ntBASIC12.78□□□□□ -0.36
UBA52P62987 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 AC083964.2-201ENST00000623988 2396 ntBASIC12.78□□□□□ -0.36
UBA52P62987 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.78□□□□□ -0.36
UBA52P62987 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBA52P62987 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
UBA52P62987 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBA52P62987 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
UBA52P62987 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.77□□□□□ -0.36
UBA52P62987 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBA52P62987 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBA52P62987 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBA52P62987 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBA52P62987 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBA52P62987 AL136982.4-201ENST00000437689 1740 ntBASIC12.77□□□□□ -0.36
UBA52P62987 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
UBA52P62987 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
UBA52P62987 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
UBA52P62987 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
UBA52P62987 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.77□□□□□ -0.37
UBA52P62987 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 ANKRD19P-201ENST00000338192 862 ntBASIC12.77□□□□□ -0.37
UBA52P62987 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
UBA52P62987 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
UBA52P62987 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.77□□□□□ -0.37
UBA52P62987 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
UBA52P62987 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.77□□□□□ -0.37
UBA52P62987 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.77□□□□□ -0.37
UBA52P62987 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.77□□□□□ -0.37
UBA52P62987 RN7SL399P-201ENST00000471648 279 ntBASIC12.77□□□□□ -0.37
UBA52P62987 TMEM198B-204ENST00000484016 896 ntBASIC12.77□□□□□ -0.37
UBA52P62987 USP32P1-208ENST00000506594 1164 ntBASIC12.77□□□□□ -0.37
UBA52P62987 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.77□□□□□ -0.37
UBA52P62987 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.77□□□□□ -0.37
UBA52P62987 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.77□□□□□ -0.37
UBA52P62987 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
UBA52P62987 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.77□□□□□ -0.37
UBA52P62987 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.77□□□□□ -0.37
UBA52P62987 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.77□□□□□ -0.37
UBA52P62987 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.77□□□□□ -0.37
UBA52P62987 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.77□□□□□ -0.37
UBA52P62987 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.77□□□□□ -0.37
UBA52P62987 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms